2024
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Mathys H, Boix CA, Akay LA, Xia Z, Davila-Velderrain J, Ng AP, Jiang X, Abdelhady G, Galani K, Mantero J, Band N, James BT, Babu S, Galiana-Melendez F, Louderback K, Prokopenko D, Tanzi RE, Bennett DA, Tsai L-H, Kellis M. Single-cell multiregion dissection of Alzheimer’s disease. Nature. 2024 July 24. Online ahead of print. doi.org/10.1038/s41586-024-07606-7.
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Kim, TH, James BT, Kahn MC, Blanco-Duque C, Abdurrob F, Islam MDR, Lavoie NS, Kellis M, Tsai L-H. Gamma entrainment using sensory stimuli alleviates chemobrain pathology and cognitive impairment induced by chemotherapy agents. Sci Trans Med. 2024 Mar 6;16(737):eadf4601. Epub 2024 Mar 6. PMID: 38446899. doi: 10.1126/scitranslmed.adf4601.
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Murdock MH, Yang C-Y, Sun N, Pao, P-C, Blanco-Duque, C, Kahn MC, Lavoie NS, Victor MB, Islam MR, Galia F, Leary N, Wang S, Bubnys A, Ma E, Akay LA, Kim TH, Sneve M, Qian Y, Lai C, McCarthy MM, Kopell N, Kellis M, Piatkevich KD, Boyden ES, Tsai L-H. Nature. 2024 Mar;627(8002):149-156. Epub 2024 Feb 28. PMID: 38418876. doi: 10.1038/s41586-024-07132-6.
2023
- Ralvenius WT, Andresen JL, Huston MM, Penney J, Bonner JM, Fenton OS, Langer R, Tsai L-H. Nanoparticle-mediated delivery of anti-PU.1 siRNA via localized intracisternal administration reduces neuroinflammation. Adv Mater. 2024 Feb;36(8):e2309225. Epub 2023 Dec 8. PMID: 38018280. doi: 10.1002/adma.202309225.
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Xiong Z, James BT, Boix CA, Park YP, Galani K, Victor MB, Sun N, Hou L, Ho L-L, Mantero J, Scannail AN, Dileep V, Dong W, Mathys H, Bennett DA, Tsai L-H, Kellis M. Epigenomic dissection of Alzheimer’s disease pinpoints causal variants and reveals epigenome erosion. Cell. 2023 Sep 28;186(20):4422-4437.e21. PMID: 37774680. doi: 10.1016/j.cell.2023.08.040.
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Dileep V, Boix CA, Mathys H, Marco A, Welch GM, Meharena HS, Loon A, Jeloka R, Peng Z, Bennett DA, Kellis M, Tsai L-H. Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration. Cell. 2023 Sep 28;186(20):4404-4421.e20. PMID: 37774679. doi: 10.1016/j.cell.2023.08.038.
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Sun N, Victor MB, Park YP, Xiong X, Scannail AN, Leary N, Prosper P, Viswanathan S, Luna X, Boix CA, James BT, Tanigawa Y, Galani K, Mathys H, Jiang X, Ng AP, Bennett DA, Tsai L-H, Kellis M. Human microglial state dynamics in Alzheimer’s disease progression. Cell. 2023 Sep 28;186(20):4386-4403.e29. PMID: 37774678. doi: 10.1016/j.cell.2023.08.037.
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Mathys H, Peng Z, Boix CA, Victor MB, Leary N, Babu S, Abdelhady G, Jiang X, Ng AP, Ghafari K, Kunisky AK, Mantero J, Galani K, Lohia VN, Fortier GE, Lotfi Y, Ivey J, Brown HP, Patel PR, Chakraborty N, Beaudway JI, Imhoff EJ, Keller CF, McChesney MM, Patel HH, Patel SP, Thai MT, Bennett DA, Kellis M, Tsai L-H. Single-cell atlas reveals correlates of high cognitive function, dementia, and resilience to Alzheimer’s disease pathology. Cell. 2023 Sep 28;186(20):4365-4385.e27. PMID: 37774677. doi: 10.1016/j.cell.2023.08.039.
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Ralvenius, WT, Mungenast AE, Woolf H, Huston MM, Gillingham TZ, Godin SK, Penney J, Cam HP, Gao F, Fernandez CG, Czako B, Lightfoot Y, Ray WJ, Beckmann A, Goate AM, Marcora E, Romeo-Molina C, Ayata P, Schaefer A, Gjoneska E, Tsai L-H. A novel molecular class that recruits HDAC/MECP2 co-repressor complexes to PU.1 motifs reduces neurodegeneration and inflammation. J Exp Med. 2023 Nov 6;220(11):e20222105. Epub 2023 Aug 29. PMID: 37642942. doi: 10.1084/jem.20222105.
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Sun N, Akay LA, Murdock MH, Park Y, Galiana-Melendez F, Bubnys A, Galani K, Mathys H, Jiang X, Ng AP, Bennett DA, Tsai L-H, Kellis M. Single-nucleus multi-region transcriptomic analysis of brain vasculature in Alzheimer’s disease. Nat Neuro. 2023. Jun;26(6):970-982. Epub 2023 Jun 1. PMID: 37264161. doi: 10.1038/s41593-023-01334-3.
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Suk HJ, Buie N, Xu G, Banerjee A, Boyden ES, Tsai L-H. Vibrotactile stimulation at gamma frequency mitigates pathology related to neurodegeneration and improves motor function. Front Aging Neuro. May 18;15:1129510. PMID: 37273653. doi: 10.3389/fnagi.2023.1129510.
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Huang W-C, Peng Z, Murdock MH, Liu L, Mathys H, Davila-Velderrain J, Jiang X, Chen M, Ng AP, Kim TH, Abdurrob F, Gao F, Bennett DA, Kellis M, Tsai L-H. Lateral mammillary body neurons in mouse brain are disproportionately vulnerable in Alzheimer’s disease. Sci Trans Med. 2023. Apr 19;15(692):eabq1019. Epub 2023 Apr 19. doi: 10.1126/scitranslmed.abq1019.
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Pao P-C, Seo J, Lee A, Kritskiy O, Patnaik D, Penney J, Raju RM, Geigenmuller U, Silva MC, Lucente DE, Gusella JF, Dickerson BC, Loon A, Yu MX, Bula M, Yu M, Haggarty SJ, Tsai L-H. A novel Cdk5-derived peptide inhibits Cdk5/p25 activity and improves neurodegenerative phenotypes. PNAS. 2023. Epub 2023 Apr 12. doi: 10.1073/pnas.2217864120.
2022
- Diane Chan, Ho-Jun Suk, Brennan Leo Jackson, Noah P Milman, Danielle Stark, E.B. Klerman, Erin Kitchener, Vanesa S. Fernandez Avalos, Gabrielle de Weck, Arit Banerjee A, S.D. Beach, Joel Blanchard J, C. Stearns, A.D. Boes, B. Uitermarkt B, P. Gander P, M. Howard M, E.J. Sternberg EJ, A. Nieto-Castanon A, S. Anteraper, S. Whitfield-Gabrieli, Emery N. Brown, Edward S. Boyden, B.C. Dickerson, Li-Huei Tsai. Gamma frequency sensory stimulation in mild probable Alzheimer’s dementia patients: Results of feasibility and pilot studies. PLoS One. 2022 Dec 1;17(12):e0278412. eCollection 2022. PMI: 36454969. https://doi-org.ezproxy.canberra.edu.au/10.1371/journal.pone.0278412.
- Joel W. Blanchard, Leyla Akay LA, Jose Davila-Velderrain, Djuna von Maydell, Hansruedi Mathys, S.M.Davidson, Audrey Effenberger, C-U Chen, K. Maner-Smith, I. Hajjar, E.A. Ortlund, Michael Bula, Emre Agbas, A. Ng A, Xueqiao Jiang, Martin Kahn, Cristina Blanco-Duque, Nic Lavoie, Liwang Liu, R. Reyes R, Y-T Lin, T. Ko, L. R’Bibo, William Ralvenius, D.A. Bennett, Hugh P. Cam, Manolis Kellis, Li-Huei Tsai. APOE4 impairs myelination via cholesterol dysregulation in oligodendrocytes. Nature. 2022. Epub 2022 Nov 16. https://doi-org.ezproxy.canberra.edu.au/10.1038/s41586-022-05439-w.
- Gwyneth M. Welch, Carles A. Boix, E. Schmauch, Jose Davila-Velderrain, Matheus B Victor, Vishnu Dileep, P. Lorenzo Bozzelli,, Q. Su, J.D. Cheng, A. Lee, Noelle S. Leary, A.R. Pfenning, Manolis Kellis M, Li-Huei Tsai. Neurons burdened by DNA double-strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration. Sci Adv. 2022 Sep 30;8(39):eabo4662. doi: 10.1126/sciadv.abo4662. Epub 2022 Sep 28.
- Chinakkaruppan Adaikkan, J. Wang, Karim Abdelaal, S.J. Middleton, P. Lorenzo Bozzelli, Ian Wickersham I, T.J. McHugh, Li-Huei Tsai. Alterations in a cross-hemispheric circuit associates with novelty discrimination deficits in mouse models of neurodegeneration. Neuron. 2022 Oct 5;110(19):3091-3105.e9. Epub 2022 Aug 19. https://doi-org.ezproxy.canberra.edu.au/10.1016/j.neuron.2022.07.023.
- Matheus B. Victor, Noelle Leary, Xochitl Luna, Hiruy S. Meharena, A.N. Scannail, P. Lorenzo Bozzelli, George S. Samaan, Mitchell H. Murdock, Djuna von Maydell, Audrey H. Effenberger, Oyku Cerit, H-L Wen, Liwang Liu, Gwyneth Welch, Maeve Bonner, Li-Huei Tsai. Lipid accumulation induced by APOE4 impairs microglial surveillance of neuronal-network activity. Cell Stem Cell. 2022 Aug 4;29(8):1197-1212.e8. PMID: 35931030. https://doi-org.ezproxy.canberra.edu.au/10.1016/j.stem.222.07.005.
- Hiruy Meharena, Asaf Marco, Vishnu Dileep, Elana R. Lockshin, Grace Y. Akatsu, James Mullahoo, L. Ashley Watson, Tak Ko, Lindsey N. Guerin, Fatema Abdurrob, Shruthi Rengarajan, Malvina Papanastasiou, Jacob D. Jaffe, Li-Huei Tsai. Down-syndrome-induced senescence disrupts the nuclear architecture of neural progenitors.
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2021
- Ryan Stott, Oleg Kritsky, Li-Huei Tsai. Profiling DNA break sites and transcriptional changes in response to contextual fear learning. PLOS One. 2021 Jul1;16(7):e0249691. https://doi-org.ezproxy.canberra.edu.au/10.1371/journal.pone.0249691.
- Grzegorz Sienski, Priyanka Narayan, Julia Maeve Bonner, Nora Kory, Sebastian Boland, Aleksandra A. Arczewska, William T. Ralvenius, Leyla Akay, Elana Lockshin, Liang He, Blerta Milo, Agnese Graziosi, Valeriya Baru, Caroline A. Lewis, Manolis Kellis, David Sabatini, Li-Huei Tsai, APOE4 disrupts intracellular lipid homeostasis in human iPSC-derived glia, Science Transl Med. Mar 3;13(583):eaaz4564. doi: 10.1126/scitranslmed.aaz4564.
2020
- Asaf Marco, Hiruy S. Meharena, Vishnu Dileep, Ravikiran Raju, Jose Davila-Velderrain, Zhang A, Chinnakkaruppan Adaikkan, Jennie Z. Young, Fan Gao, Manolis Kellis, Li-Huei Tsai. Mapping the epigenomic and transcriptomic interplay during memory formation and recall in the hippocampal engram ensemble. Nat Neurosci. 2020 Dec;23(12):1606-1617. doi: 10.1038/s41593-020-00717-0.
- Joel W. Blanchard, Michael Bula, Jose Davila-Velderrain, Leyla Anne Akay, Lena Zhu, Alexander Frank, Matheus B. Victor, Julia Maeve Bonner, Hansruedi Mathys, Yuan-Ta Lin, Tak Ko, David A. Bennett, Hugh P. Cam, Manolis Kellis, Li-Huei Tsai, Reconstruction of the Human Blood-Brain Barrier in vitro reveals a Pathogenic Mechanism of APOE4 in Pericytes, Nature Medicine 2020 Jun;26(6):952-963. doi: 10.1038/s41591-020-0886-4.
- Ping-Chieh Pao, Debasis Patnaik, L. Ashley Watson, Fan Gao, Ling Pan, Jun Wang, Chinnakkaruppan Adaikkan, Jay Penney, Hugh P. Cam, Wen-Chin Huang, Lorena Pantano, Audrey Lee, Alexi Nott, Trongha X. Phan, Elizabeta Gjoneska, Sara Elmsaouri, Stephen J. Haggarty, Li-Huei Tsai, HDAC1 modulates OGG1-initiated oxidative DNA damage repair in the aging brain and Alzheimer’s disease. Nature Commun, 2020 May 18; 11(1): 2484. doi: 10.1038/s41467-020-16361-y.
2019
- Rebecca Gail Canter, Wen-Chin Huang, Heejin Choi, Jun Wang, Lauren Ashley Watson, Christine G. Yao, Fatema Abdurrob, Stephanie M. Bousleiman, Jennie Z. Young, David A. Bennett, Ivana Delalle, Kwanghun Chung, Li-Huei Tsai, 3D mapping reveals network-specific amyloid progression and subcortical susceptibility in mice. Commun Biol 2, 360 (2019) doi:10.1038/s42003-019-0599-8
- Fan Q, Gayen M, Singh N, Gao F, He W, He X, Tsai L-H, Yan R. The intracellular domain of CX3CL1 regulates adult neurogenesis and Alzheimer’s amyloid pathology. Journal of Experimental Medicine, 2019 Jun 17. pii: jem20182238. Doi: 10. 1084/jem.20182238.
- Chinnakkaruppan Adaikkan, Steven J. Middleton, Asaf Marco, Ping-Chieh Pao, Hansruedi Mathys, David Nam-Woo Kim, Fan Gao, Jennie Z. Young, Ho-Jun Suk, Edward S. Boyden, Thomas J. McHugh, Li-Huei Tsai. (2019) Gamma Entrainment Binds Higher-Order Brain Regions and Offers Neuroprotection. Neuron, 7 May 2019; Doi: 10.1016/j.neuron.2019.04.011
- Mathys, Hansruedi, Davila-Velderrain, Jose, Peng, Zhuyu, Gao, Fan, Mohammadi, Shahin, Young, Jennie Z., Menon, Madhvi, He, Liang, Abdurrob, Fatema, Jiang, Xueqiao, Martorell, Anthony J., Ransohoff, Richard M., Hafler, Brian P., Bennett, David A., Kellis, Manolis, Tsai, Li-Huei. (2019) Single-cell transcriptomic analysis of Alzheimer’s disease. Nature, 1 May 2019; Doi: 10.1038/s41586-019-1195-2
- Anthony J. Martorell, Abigail L. Paulson, Ho-Jun Suk, Fatema Abdurrob, Gabrielle T. Drummond, Webster Guan, Jennie Z. Young, David Nam-Woo Kim, Oleg Kritskiy, Scarlett J .Barker, Vamsi Mangena, Stephanie M. Prince, Emery N. Brown, Kwanghun Chung, Edward S. Boyden, Annabelle C. Singer, Li-Huei Tsai. (2019) Multi-sensory Gamma Stimulation Ameliorates Alzheimer’s-Associated Pathology and Improves Cognition. Cell, 4 April 2019; Volume 177, Issue 2, P256-271.e22. Doi: 10.1016/j.cell.2019.02.014
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2018
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2017
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2016
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2015
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2014
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2013
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2012
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2011
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2010
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- Ge X, Frank CL, Calderon F, Tsai LH. Hook3 interacts with PCM1 to regulate the pericentriolar material assembly and the timing of neurogenesis. Neuron, 2010. Jan 28;65(2):191-203. 10.1016/j.neuron.2010.01.011. PMCID: PMC2902371.
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2009
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2008
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2007
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2006
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2005
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2004
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2003
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2002
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2001
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2000
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1999
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1998
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1997
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1996
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1995
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1994
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- Cao L, Faha B, Dembski M, Tsai LH, Harlow E, Dyson N. Independent binding of the retinoblastoma protein and p107 to the transcription factor E2F. Nature 1992;355:176-179. DOI: 10.1038/355176a0
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1991
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- Tsai LH, Harlow E, Meyerson M. Isolation of the human cdk2 gene that encodes the cyclin A- and adenovirus E1A-associated p33 kinase. Nature 1991;353:174-77. 10.1038/353174a0.
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1990
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- Chen Q, Cheng JT, Tsai LH, Scheneider N, Buchanan G, Carroll A, Crist W, Ozanne B, Siciliano MJ, Baer R. The tal gene undergoes chromosome translocation in T cell leukemia and potentially encodes a helix-loop-helix protein. EMBO J 1990 ;9:415-24. 2303035.
- Tsai LH, Nanu L, Smith RG, Ozanne B. Overexpression of c-fos in a human pre-B cell acute lymphocytic leukemia derived cell line, SMS-SB. Oncogene 1990;6:81-8. 1704120.
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1988
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- Tsai LH, Collins MT, Hoiby N. Antigenic analysis of Pasteurella haemolytics serovars 1 through 15 by crossed immuoelectrophoresis. Am J Vet Res 1988;49:213-22. 2450496.